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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM1048Gifsy-2 prophage host specificity protein J, phage lambda. (815 aa)    
Predicted Functional Partners:
STM1045
Gifsy-2 prophage probable minor tail protein; Lambda phage L tail component homolog (gi|2232360).
  
    0.938
STM1046
Gifsy-2 prophage probable tail assembly protein.
  
    0.887
STM2594
Gifsy-1 prophage protein; Similar to phage tail component H; lambda phage H tail component homolog (gi|2232364).
 
    0.865
STM1041
Gifsy-2 prophage probable minor tail protein; Lambda phage H tail component homolog (gi|2232364).
 
    0.858
STM1047
Gifsy-2 prophage probable tail assembly protein.
 
    0.834
STM0918
Putative Fels-1 prophage minor tail protein; Lambda phage H tail component homolog (gi|2232364).
 
    0.819
STM0922
Putative Fels-1 prophage tail assembly protein.
  
    0.611
STM3192
Putative arylsulfate sulfotransferase.
  
    0.561
misL
Putative autotransported protein; Pathogenicity island encoded protein: SPI3; MisL (gi|4324610).
  
    0.524
STM2592
Gifsy-1 prophage protein; Similar to phage tail component L.
  
    0.493
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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