Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
STM1054Gifsy-2 prophage protein; Hypothetical protein (gi|5410523). (99 aa)    
Predicted Functional Partners:
STM2704
Fels-2 prophage protein; Similar to genes in P2-like phages; unknown (gi|2852345).
      
 0.951
STM2706
Fels-2 prophage protein; Similar to tail fiber protein in phage P2.
      
 0.940
STM2703
Fels-2 prophage protein; Similar to invertase (pin) in phage E14; unknown (gi|2852344).
      
 0.868
STM2769
Similar to E. coli IS3 putative transposase (AAC75150.1); Blastp hit to AAC75150.1 (288 aa), 84% identity in aa 1 - 288.
      
 0.852
STM1055
Gifsy-2 prophage protein; Hypothetical protein (gi|5410522).
  
    0.779
umuC
Error-prone repair protein; Involved in UV protection and mutation. Essential for induced (or SOS) mutagenesis. May modify the DNA replication machinery to allow bypass synthesis across a damaged template.
      
 0.726
hin
H inversion protein; A DNA fragment of approximately 900 base pairs, adjacent to the fljB (H2) gene, which specifies the synthesis of phase-2 flagellin, can exist in either orientation with respect to fljB. The orientation of the inversion region controls expression of fljB. The hin gene occupies about two-thirds of the inversion region; it is required for the inversion of the fljB controlling region.
      
 0.702
sirC
Regulator of invasion genes; Required for maximal expression of sirC, not required to invade host cells.
      
 0.672
STM1053
Gifsy-2 prophage protein; Similar to E. coli orf, hypothetical protein (AAC74998.1); Blastp hit to AAC74998.1 (217 aa), 85% identity in aa 1 - 178; Belongs to the SOS response-associated peptidase family.
       0.605
STM2767
Putative superfamily I DNA and RNA helicase.
      
 0.491
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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