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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssaNHomology with the YscN family of proteins; probable secretion system apparatus ATP synthase SSAN. (SW:SSAN_SALTY); Belongs to the ATPase alpha/beta chains family. (433 aa)    
Predicted Functional Partners:
ssaV
Secretion system apparatus protein; Component of Salmonella pathogenicity island 2 (SPI-2) type III secretion system, required for secretion of some type III-secreted effectors including the SpvB toxin.
 
  
 0.996
ssaQ
Secretion system apparatus protein; Part of a type III secretion system.
  
 
 0.989
ssaJ
Secretion system apparatus protein; Component of Salmonella pathogenicity island 2 (SPI-2) type III secretion system, required for secretion of some type III-secreted effectors including the SpvB toxin.
 
  
 0.984
ssaT
Secretion system apparatus protein; Part of a type III secretion system; Belongs to the FliR/MopE/SpaR family.
 
  
 0.982
ssaR
Homology with YscR of the secretion system of Yersinia; virulence protein yscr (SW:YSCR_SALTY).
 
  
 0.974
ssaK
Secretion system apparatus protein SSAK. (SW:SSAK_SALTY).
  
 
 0.963
ssaL
Secretion system apparatus protein SSAL. (SW:SSAL_SALTY).
  
  
 0.949
ssaO
Secretion system apparatus protein SSAO. (SW:SSAO_SALTY).
  
    0.940
ssaU
Secretion system apparatus protein; Part of a type III secretion system; Belongs to the type III secretion exporter family.
 
  
 0.929
flhA
Flagellar biosynthesis protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.
 
  
 0.929
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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