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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM1733Similar to E. coli putative ferredoxin (AAC73391.1); Blastp hit to AAC73391.1 (109 aa), 74% identity in aa 1 - 109. (134 aa)    
Predicted Functional Partners:
yciC
Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC74337.1); Blastp hit to AAC74337.1 (247 aa), 87% identity in aa 1 - 247.
  
    0.750
yciB
Putative intracellular septation protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.629
ydcP
Similar to E. coli putative collagenase (AAC74517.1); Blastp hit to AAC74517.1 (667 aa), 92% identity in aa 20 - 667.
  
     0.486
yhjL
Putative TPR-repeat-containing protein; Required for maximal bacterial cellulose synthesis. Belongs to the AcsC/BcsC family.
 
     0.447
yciA
Putative Acyl-CoA hydrolase; Catalyzes the hydrolysis of the thioester bond in palmitoyl- CoA and malonyl-CoA.
       0.438
yhjQ
Putative ATPase involved in chromosome partitioning; Essential for cellulose biosynthesis. May play a role in subcellular localization of an active cellulose biosynthesis apparatus at the bacterial cell pole (By similarity); Belongs to the BcsQ family.
  
     0.432
STM2532
Putative inner membrane lipoprotein; Protects the bacterial cell from host peptidases.
  
     0.425
apeE
Outer membrane N-acetyl phenylalanine beta-naphthyl ester-cleaving esterase; Outer membrane esterase (gi|2896133).
 
     0.420
pbpC
Transglycosylase of penicillin-binding protein 1c; Similar to E. coli putative peptidoglycan enzyme (AAC75572.1); Blastp hit to AAC75572.1 (770 aa), 82% identity in aa 7 - 767.
  
     0.418
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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