STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
oppCOligopeptide transport protein; Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily. (302 aa)    
Predicted Functional Partners:
oppF
Oligopeptide transport protein; Part of the binding-protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily.
 0.999
oppD
Oligopeptide transport protein; Part of the binding-protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily.
 0.999
oppB
Oligopeptide transport protein; Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.
 0.999
oppA
Oligopeptide transport protein with chaperone properties; This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity; Belongs to the bacterial solute-binding protein 5 family.
 
 0.999
dppD
Dipeptide transport protein; ABC superfamily (atp_bind); similar to E. coli putative ATP-binding component of dipeptide transport system (AAC76566.1); Blastp hit to AAC76566.1 (327 aa), 95% identity in aa 1 - 327; Belongs to the ABC transporter superfamily.
 
 0.992
mppA
Periplasmic murein tripeptide transport protein; Also negative regulator of mulitple antibiotic resistance; similar to E. coli putative transport periplasmic protein (AAC74411.1); Blastp hit to AAC74411.1 (544 aa), 92% identity in aa 8 - 544.
 
 0.987
dppF
Dipeptide transport protein; ABC superfamily (atp_bind); similar to E. coli putative ATP-binding component of dipeptide transport system (AAC76565.1); Blastp hit to AAC76565.1 (334 aa), 95% identity in aa 1 - 334; Belongs to the ABC transporter superfamily.
 
 0.987
yliA
Putative ATPase components of ABC-type transport system, contain duplicated ATPase domain; Part of the ABC transporter complex GsiABCD involved in glutathione import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Glutathione importer (TC 3.A.1.5.11) family.
 
 0.985
sapD
ABC superfamily peptide transport protein; Involved in a peptide intake transport system that plays a role in the resistance to antimicrobial peptides. Belongs to the ABC transporter superfamily.
 
  
 0.974
sapF
ABC superfamily peptide transport protein; Involved in a peptide intake transport system that plays a role in the resistance to antimicrobial peptides. Belongs to the ABC transporter superfamily.
 
     0.971
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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