Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
STM1851 | prpA | STM1851 | STM1853 | Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC74906.1); Blastp hit to AAC74906.1 (83 aa), 88% identity in aa 6 - 83. | Serine/threonine protein phosphatase; Can hydrolyze phosphorylated Ser-, Thr- or Tyr-substrates in vitro. The natural substrate is unknown. | 0.765 |
STM1851 | yebW | STM1851 | STM1852 | Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC74906.1); Blastp hit to AAC74906.1 (83 aa), 88% identity in aa 6 - 83. | Putative inner membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC74907.1); Blastp hit to AAC74907.1 (91 aa), 87% identity in aa 29 - 91. | 0.963 |
STM1854 | prpA | STM1854 | STM1853 | Putative inner membrane protein. | Serine/threonine protein phosphatase; Can hydrolyze phosphorylated Ser-, Thr- or Tyr-substrates in vitro. The natural substrate is unknown. | 0.446 |
prpA | STM1851 | STM1853 | STM1851 | Serine/threonine protein phosphatase; Can hydrolyze phosphorylated Ser-, Thr- or Tyr-substrates in vitro. The natural substrate is unknown. | Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC74906.1); Blastp hit to AAC74906.1 (83 aa), 88% identity in aa 6 - 83. | 0.765 |
prpA | STM1854 | STM1853 | STM1854 | Serine/threonine protein phosphatase; Can hydrolyze phosphorylated Ser-, Thr- or Tyr-substrates in vitro. The natural substrate is unknown. | Putative inner membrane protein. | 0.446 |
prpA | yebW | STM1853 | STM1852 | Serine/threonine protein phosphatase; Can hydrolyze phosphorylated Ser-, Thr- or Tyr-substrates in vitro. The natural substrate is unknown. | Putative inner membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC74907.1); Blastp hit to AAC74907.1 (91 aa), 87% identity in aa 29 - 91. | 0.767 |
prpA | yfeA | STM1853 | STM2410 | Serine/threonine protein phosphatase; Can hydrolyze phosphorylated Ser-, Thr- or Tyr-substrates in vitro. The natural substrate is unknown. | Diguanylate cyclase/phosphodiesterase domain 2; similar to E. coli orf, hypothetical protein (AAC75454.1); Blastp hit to AAC75454.1 (768 aa), 68% identity in aa 45 - 766. | 0.437 |
yebW | STM1851 | STM1852 | STM1851 | Putative inner membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC74907.1); Blastp hit to AAC74907.1 (91 aa), 87% identity in aa 29 - 91. | Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC74906.1); Blastp hit to AAC74906.1 (83 aa), 88% identity in aa 6 - 83. | 0.963 |
yebW | prpA | STM1852 | STM1853 | Putative inner membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC74907.1); Blastp hit to AAC74907.1 (91 aa), 87% identity in aa 29 - 91. | Serine/threonine protein phosphatase; Can hydrolyze phosphorylated Ser-, Thr- or Tyr-substrates in vitro. The natural substrate is unknown. | 0.767 |
yfeA | prpA | STM2410 | STM1853 | Diguanylate cyclase/phosphodiesterase domain 2; similar to E. coli orf, hypothetical protein (AAC75454.1); Blastp hit to AAC75454.1 (768 aa), 68% identity in aa 45 - 766. | Serine/threonine protein phosphatase; Can hydrolyze phosphorylated Ser-, Thr- or Tyr-substrates in vitro. The natural substrate is unknown. | 0.437 |