Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pagOPredicted integral membrane protein; PAGO protein. (SW:PAGO_SALTY). (304 aa)    
Predicted Functional Partners:
STM1863
Putative inner membrane protein.
     
 0.856
STM1864
Putative inner membrane protein.
  
    0.855
ais
Aluminum inducible protein; Catalyzes the dephosphorylation of heptose(II) of the outer membrane lipopolysaccharide core. Required for iron(3+) resistance. Belongs to the phosphoglycerate mutase family. Ais subfamily.
      
 0.851
allB
Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
   
  
 0.725
pipD
Pathogenicity island encoded protein: SPI5.
   
  
 0.721
allP
Similar to E. coli putative transport protein (AAC73613.1); Blastp hit to AAC73613.1 (437 aa), 92% identity in aa 1 - 437.
   
  
 0.701
pagD
PhoP regulated; Putative function in virulence. Could be involved in promoting S.typhimurium survival within macrophages.
   
  
 0.688
lpxO
Putative dioxygenase for synthesis of lipid; Putative dioxygenase; LpxO (gi|9454389).
      
 0.674
ratB
Putative outer membrane protein; RatB (gi|5107806).
      
 0.673
pagK
PhoPQ-activated protein; PagK (gi|2582047).
   
  
 0.651
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.