STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
STM1934Putative outer membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC74974.1); Blastp hit to AAC74974.1 (107 aa), 61% identity in aa 1 - 104. (111 aa)    
Predicted Functional Partners:
flgH
Flagellar biosynthesis protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
   0.836
flgI
Putative flagella basal body protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
   0.822
fliE
Flagellar hook-basal body complex protein FLIE. (SW:FLIE_SALTY).
   
    0.667
fliO
Flagellar protein FLIO. (SW:FLIO_SALTY).
   
    0.593
flhB
Putative part of export apparatus for flagellar proteins; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
   
    0.546
fliQ
Flagellar biosynthesis protein; Required for the assembly of the rivet at the earliest stage of flagellar biosynthesis; Belongs to the FliQ/MopD/SpaQ family.
   
    0.501
ymdA
Putative periplasmic protein; Hypothetical protein in csgC-mdoG intergenic region precursor. (SW:YMDA_SALTY); To the N-terminal of the FimA/PapA family of fimbria proteins.
   
    0.500
fliF
Basal-body MS (membrane and supramembrane)-ring and collar protein; The M ring may be actively involved in energy transduction.
   
    0.500
spaS
Surface presentation of antigens; Involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells; Belongs to the type III secretion exporter family.
   
    0.500
flhE
Flagellar protein; Not essential for flagellar formation and function.
   
    0.470
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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