Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| flgA | yeeI | STM1173 | STM2001 | Flagellar biosynthesis protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 0.454 |
| iap | yeeI | STM2936 | STM2001 | Similar to E. coli alkaline phosphatase isozyme conversion, aminopeptidase (AAC75795.1); Blastp hit to AAC75795.1 (345 aa), 85% identity in aa 1 - 344. | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 0.499 |
| mlc | yeeI | STM1488 | STM2001 | Transcriptional repressor of ptsG and ptsHI; Global repressor of carbohydrate metabolism (pts operon) (NagC/XylR family); similar to E. coli putative NAGC-like transcriptional regulator (AAC74666.1); Blastp hit to AAC74666.1 (406 aa), 90% identity in aa 1 - 406. | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 0.751 |
| panC | thiC | STM0181 | STM4164 | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 5'-phosphoryl-5-aminoimidazole; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.423 |
| panC | yeeI | STM0181 | STM2001 | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 0.653 |
| rfbK | rfbM | STM2083 | STM2084 | Phosphomannomutase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group B O antigen; Belongs to the phosphohexose mutase family. | Mannose-1-phosphate guanylyltransferase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group B O antigen; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.999 |
| rfbK | yeeI | STM2083 | STM2001 | Phosphomannomutase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group B O antigen; Belongs to the phosphohexose mutase family. | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 0.673 |
| rfbM | rfbK | STM2084 | STM2083 | Mannose-1-phosphate guanylyltransferase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group B O antigen; Belongs to the mannose-6-phosphate isomerase type 2 family. | Phosphomannomutase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group B O antigen; Belongs to the phosphohexose mutase family. | 0.999 |
| rfbM | yeeI | STM2084 | STM2001 | Mannose-1-phosphate guanylyltransferase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group B O antigen; Belongs to the mannose-6-phosphate isomerase type 2 family. | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 0.697 |
| thiC | panC | STM4164 | STM0181 | 5'-phosphoryl-5-aminoimidazole; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.423 |
| thiC | yeeI | STM4164 | STM2001 | 5'-phosphoryl-5-aminoimidazole; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 0.576 |
| ycdY | yeeI | STM1137 | STM2001 | Similar to E. coli putative oxidoreductase component (AAC74119.1); Blastp hit to AAC74119.1 (184 aa), 86% identity in aa 1 - 184. | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 0.506 |
| ycfJ | yeeI | STM1212 | STM2001 | Putative outer membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC74194.1); Blastp hit to AAC74194.1 (179 aa), 94% identity in aa 1 - 178. | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 0.440 |
| yeeI | flgA | STM2001 | STM1173 | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | Flagellar biosynthesis protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | 0.454 |
| yeeI | iap | STM2001 | STM2936 | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | Similar to E. coli alkaline phosphatase isozyme conversion, aminopeptidase (AAC75795.1); Blastp hit to AAC75795.1 (345 aa), 85% identity in aa 1 - 344. | 0.499 |
| yeeI | mlc | STM2001 | STM1488 | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | Transcriptional repressor of ptsG and ptsHI; Global repressor of carbohydrate metabolism (pts operon) (NagC/XylR family); similar to E. coli putative NAGC-like transcriptional regulator (AAC74666.1); Blastp hit to AAC74666.1 (406 aa), 90% identity in aa 1 - 406. | 0.751 |
| yeeI | panC | STM2001 | STM0181 | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.653 |
| yeeI | rfbK | STM2001 | STM2083 | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | Phosphomannomutase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group B O antigen; Belongs to the phosphohexose mutase family. | 0.673 |
| yeeI | rfbM | STM2001 | STM2084 | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | Mannose-1-phosphate guanylyltransferase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group B O antigen; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.697 |
| yeeI | thiC | STM2001 | STM4164 | Putative inner membrane protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 5'-phosphoryl-5-aminoimidazole; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.576 |
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