STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pduHPropanediol utilization diol dehydratase reactivation protein. (116 aa)    
Predicted Functional Partners:
pduG
Propanediol utilization diol dehydratase reactivation protein.
 
 
 0.999
pduE
Propanediol utilization dehydratase, small subunit; Part of the PduCDE complex that catalyzes the dehydration of 1,2-propanediol to propionaldehyde. Is required for S.typhimurium growth on 1,2-propanediol as the sole carbon and energy source; Belongs to the diol/glycerol dehydratase small subunit family.
 
  
 0.998
pduC
Propanediol utilization dehydratase, large subunit; Part of the PduCDE complex that catalyzes the dehydration of 1,2-propanediol to propionaldehyde. Is required for S.typhimurium growth on 1,2-propanediol as the sole carbon and energy source.
 
  
 0.995
pduD
Propanediol utilization dehydratase, medium subunit; Part of the PduCDE complex that catalyzes the dehydration of 1,2-propanediol to propionaldehyde. Is required for S.typhimurium growth on 1,2-propanediol as the sole carbon and energy source.
 
  
 0.994
pudB
Polyhedral bodies; propanediol utilization protein PDUB. (SW:PDUB_SALTY).
 
  
 0.988
pduO
Propanediol utilization B12 related protein; Belongs to the Cob(I)alamin adenosyltransferase family.
 
  
 0.986
pduP
Propanediol utilization CoA-dependent propionaldehyde dehydrogenase; Similar to E. coli ethanolamine utilization; similar to acetaldehyde dehydrogenase (AAC75508.1); Blastp hit to AAC75508.1 (467 aa), 45% identity in aa 1 - 466.
 
  
 0.986
pduN
Propanediol utilization protein; Polyhedral bodies; similar to E. coli detox protein (AAC75509.1); Blastp hit to AAC75509.1 (95 aa), 43% identity in aa 1 - 83.
 
  
 0.984
pduV
Propanediol utilization protein PDUV. (SW:PDUV_SALTY).
 
  
 0.977
pduT
Propanediol utilization protein; Polyhedral bodies; similar to E. coli detox protein (AAC75510.1); Blastp hit to AAC75510.1 (111 aa), 41% identity in aa 16 - 93, 31% identity in aa 16 - 90.
  
  
 0.967
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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