Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wzxCPutative export protein; In colanic acid gene cluster; similar to E. coli probable export protein (AAC75107.1); Blastp hit to AAC75107.1 (492 aa), 85% identity in aa 1 - 492. (492 aa)    
Predicted Functional Partners:
wcaK
Putative galactokinase; In colanic acid gene cluster; similar to E. coli putative galactokinase. (AAC75106.1); Blastp hit to AAC75106.1 (426 aa), 67% identity in aa 1 - 426.
 
  
 0.994
wcaL
Putative glycosyl transferase; In colanic acid gene cluster; putative colanic acid biosynthesis glycosyl transferase WCAL. (SW:WCAL_SALTY).
 
  
 0.993
wcaJ
Putative UDP-glucose lipid carrier transferase; In colanic acid gene cluster; similar to E. coli putative colanic acid biosynthsis UDP-glucose lipid carrier transferase (AAC75108.1); Blastp hit to AAC75108.1 (464 aa), 89% identity in aa 1 - 464; glucose-1-phosphate transferase.
 
  
 0.964
wcaA
Putative glycosyl transferase; In colanic acid gene cluster; similar to E. coli putative regulator (AAC75120.1); Blastp hit to AAC75120.1 (279 aa), 91% identity in aa 3 - 279.
 
  
 0.908
wza
Putative polysaccharide export protein; Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium.
 
  
 0.907
wzc
Putative tyrosine-protein kinase; Required for the extracellular polysaccharide colanic acid synthesis. The autophosphorylated form is inactive. Probably involved in the export of colanic acid from the cell to medium (By similarity). Belongs to the etk/wzc family.
 
  
 0.889
wcaC
Putative glycosyl transferase; In colanic acid gene cluster; similar to E. coli putative glycosyl transferase (AAC75118.1); Blastp hit to AAC75118.1 (405 aa), 80% identity in aa 1 - 405.
 
  
 0.883
wcaM
Colanic acid biosynthesis protein WCAM. (SW:WCAM_SALTY).
  
  
 0.837
rfbC
dTDP-4,deoxyrhamnose 3,5 epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.828
rfbP
Undecaprenol-phosphate galactosephosphotransferase, and; Is responsible for transferring galactose-1-phosphate to the lipid precursor undecaprenol phosphate in the first steps of O- polysaccharide biosynthesis; Belongs to the bacterial sugar transferase family.
  
  
 0.816
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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