Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
wcaBPutative acyl transferase; In colanic acid gene cluster; similar to E. coli putative transferase (AAC75119.1); Blastp hit to AAC75119.1 (162 aa), 91% identity in aa 1 - 160; Belongs to the transferase hexapeptide repeat family. (162 aa)    
Predicted Functional Partners:
wcaC
Putative glycosyl transferase; In colanic acid gene cluster; similar to E. coli putative glycosyl transferase (AAC75118.1); Blastp hit to AAC75118.1 (405 aa), 80% identity in aa 1 - 405.
 
  
 0.990
wcaF
Putative acyltransferase; In colanic acid gene cluster; similar to E. coli putative transferase (AAC75115.1); Blastp hit to AAC75115.1 (182 aa), 87% identity in aa 1 - 180.
  
  
 0.956
wcaD
Similar to E. coli putative colanic acid polymerase (AAC75117.1); Blastp hit to AAC75117.1 (405 aa), 93% identity in aa 1 - 404.
  
  
 0.924
wcaE
Putative transferase; In colanic acid gene cluster; similar to E. coli putative colanic acid biosynthesis glycosyl transferase (AAC75116.1); Blastp hit to AAC75116.1 (248 aa), 71% identity in aa 1 - 248.
 
  
 0.922
cysK
Subunit of cysteine synthase A and O-acetylserine sulfhydrolase A; Two cysteine synthase enzymes are found, this enzyme and CysM; both catalyze the same reaction. Cysteine synthase B (CysM) can also use thiosulfate in place of sulfide to give cysteine thiosulfonate as a product.
 
 
 0.903
wcaA
Putative glycosyl transferase; In colanic acid gene cluster; similar to E. coli putative regulator (AAC75120.1); Blastp hit to AAC75120.1 (279 aa), 91% identity in aa 3 - 279.
 
  
 0.895
wcaI
Putative glycosyl transferase; In colanic acid gene cluster; similar to E. coli putative colanic biosynthesis glycosyl transferase (AAC75111.1); Blastp hit to AAC75111.1 (407 aa), 85% identity in aa 1 - 407.
  
  
 0.860
wzc
Putative tyrosine-protein kinase; Required for the extracellular polysaccharide colanic acid synthesis. The autophosphorylated form is inactive. Probably involved in the export of colanic acid from the cell to medium (By similarity). Belongs to the etk/wzc family.
  
  
 0.851
gmd
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
    0.845
cysM
Cysteine synthase B; Two cysteine synthase enzymes are found. Both catalyze the same reaction. Cysteine synthase B can also use thiosulfate in place of sulfide to give cysteine thiosulfonate as a product.
 
 
 0.842
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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