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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM2135Putative inner membrane protein. (703 aa)    
Predicted Functional Partners:
yegQ
Putative protease; Similar to E. coli orf, hypothetical protein (AAC75142.1); Blastp hit to AAC75142.1 (453 aa), 96% identity in aa 1 - 453.
  
  
 0.969
STM3261
Similar to E. coli galactitol-1-phosphate dehydrogenase (AAC75152.1); Blastp hit to AAC75152.1 (346 aa), 68% identity in aa 1 - 344.
   
  
 0.902
STM3262
Transcriptional regulator of sugar metabolism; Similar to E. coli split galactitol utilization operon repressor, interrupted (AAC75148.1); Blastp hit to AAC75148.1 (148 aa), 77% identity in aa 1 - 148.
      
 0.900
STM2133
Putative cytoplasmic protein.
  
    0.803
STM2134
Putative inner membrane protein.
  
    0.788
STM4442
Putative cytoplasmic protein.
      
 0.761
STM0951
Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC76464.1); Blastp hit to AAC76464.1 (231 aa), 27% identity in aa 52 - 222, 23% identity in aa 101 - 231; Belongs to the pirin family.
      
 0.717
STM0952
Similar to E. coli putative transcriptional regulator LYSR-type (AAC73313.1); Blastp hit to AAC73313.1 (304 aa), 31% identity in aa 1 - 291; Belongs to the LysR transcriptional regulatory family.
      
 0.717
STM1554
Putative coiled-coil protein.
      
 0.687
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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