STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yegTPutative MFS family transport protein; Similar to E. coli putative nucleoside permease protein (AAC75159.1); Blastp hit to AAC75159.1 (425 aa), 94% identity in aa 1 - 425. (423 aa)    
Predicted Functional Partners:
yegU
Putative glycohydrolase; Similar to E. coli orf, hypothetical protein (AAC75160.1); Blastp hit to AAC75160.1 (334 aa), 83% identity in aa 1 - 334.
   
 0.994
yegV
Similar to E. coli putative kinase (AAC75161.1); Blastp hit to AAC75161.1 (321 aa), 76% identity in aa 1 - 321.
  
 0.994
yaaU
Similar to E. coli putative transport protein (AAC73156.1); Blastp hit to AAC73156.1 (443 aa), 86% identity in aa 1 - 439.
      
 0.852
yfbT
Similar to E. coli putative phosphatase (AAC75353.1); Blastp hit to AAC75353.1 (222 aa), 86% identity in aa 1 - 221.
  
  
 0.726
yhhX
Similar to E. coli putative regulator (AAC76465.1); Blastp hit to AAC76465.1 (345 aa), 92% identity in aa 1 - 345.
     
 0.725
yhdA
Putative diguanylate cyclase; Similar to E. coli orf, hypothetical protein (AAC76284.1); Blastp hit to AAC76284.1 (646 aa), 84% identity in aa 1 - 646.
   
  
 0.723
nupC
NUP family nucleoside transport protein; Similar to E. coli permease of transport system for 3 nucleosides (AAC75452.1); Blastp hit to AAC75452.1 (400 aa), 98% identity in aa 1 - 400; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.
   
  
 0.696
yajI
Putative outer membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC73515.1); Blastp hit to AAC73515.1 (199 aa), 73% identity in aa 21 - 199.
      
 0.676
araJ
MFS family, arabinose polymer transporter; Similar to E. coli involved in either transport or processing of arabinose polymers (AAC73499.1); Blastp hit to AAC73499.1 (394 aa), 85% identity in aa 1 - 388.
   
  
 0.648
fbaB
3-oxoacyl-[acyl-carrier-protein] synthase I; Similar to E. coli orf, hypothetical protein (AAC75158.1); Blastp hit to AAC75158.1 (374 aa), 96% identity in aa 25 - 374.
  
  
 0.632
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.