STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yejFContains duplicated ATPase domain; similar to E. coli putative ATP-binding component of a transport system (AAC75241.1); Blastp hit to AAC75241.1 (529 aa), 86% identity in aa 1 - 529; Belongs to the ABC transporter superfamily. (529 aa)    
Predicted Functional Partners:
yejE
Putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component; Similar to E. coli putative transport system permease protein (AAC75240.1); Blastp hit to AAC75240.1 (341 aa), 91% identity in aa 1 - 341.
  
 0.999
yejB
Putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component; Similar to E. coli putative transport system permease protein (AAC75239.1); Blastp hit to AAC75239.1 (364 aa), 96% identity in aa 1 - 364.
  
 0.998
yejA
Putative ABC transporter periplasmic binding protein; Similar to E. coli orf, hypothetical protein (AAC75238.1); Blastp hit to AAC75238.1 (606 aa), 86% identity in aa 3 - 603.
 
  
 0.997
yliD
Putative ABC transporter inner membrane component; Part of the ABC transporter complex GsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane.
  
 0.974
oppC
Oligopeptide transport protein; Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.
  
 0.974
dppC
Dipeptide transport protein 2; ABC superfamily (membrane); similar to E. coli dipeptide transport system permease protein 2 (AAC76567.1); Blastp hit to AAC76567.1 (300 aa), 94% identity in aa 1 - 300.
  
 0.967
STM1257
Putative ABC transporter; Putative transmembrane protein (gi|2337944).
  
 0.929
sapC
ABC superfamily peptide transport protein; Involved in a peptide intake transport system that plays a role in the resistance to antimicrobial peptides. Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.
 
   
 0.898
yjjB
Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77319.1); Blastp hit to AAC77319.1 (108 aa), 89% identity in aa 1 - 108.
      
 0.896
yliC
Putative ABC transporter periplasmic binding protein; Part of the ABC transporter complex GsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane.
  
 0.815
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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