Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STM2237Putative inner membrane protein. (109 aa)    
Predicted Functional Partners:
STM2245
Putative outer membrane protein.
      
 0.954
STM2239
Similar to antiterminator protein Q of phage P5; similar to E. coli orf, hypothetical protein (AAC73652.1); Blastp hit to AAC73652.1 (127 aa), 47% identity in aa 1 - 121.
   
  
 0.953
STM2230
Putative peptidase; Similar to E. coli SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC (AAC74267.1); Blastp hit to AAC74267.1 (139 aa), 38% identity in aa 22 - 139; Belongs to the peptidase S24 family.
   
  
 0.923
STM2236
Putative phage protein.
  
    0.920
STM2235
Putative phage protein; Similar to E. coli orf, hypothetical protein (AAC74238.1); Blastp hit to AAC74238.1 (209 aa), 62% identity in aa 1 - 74.
  
    0.881
STM2240
Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC74633.1); Blastp hit to AAC74633.1 (362 aa), 84% identity in aa 251 - 362, 43% identity in aa 14 - 238.
   
    0.659
STM2234
Putative tail fiber assembly protein.
  
    0.628
sspH2
Leucine-rich repeat protein; Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protein is an E3 ubiquitin ligase that interferes with host's ubiquitination pathway.
      
 0.480
STM2238
Putative phage protein.
       0.420
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.