STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM2243Putative tail fiber protein of phage; Similar to E. coli putative membrane protein (AAC74454.1); Blastp hit to AAC74454.1 (1122 aa), 60% identity in aa 458 - 505, 24% identity in aa 369 - 530. (263 aa)    
Predicted Functional Partners:
STM1263
Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC75039.1); Blastp hit to AAC75039.1 (216 aa), 71% identity in aa 3 - 216.
      
 0.953
STM2765
Putative transposase.
      
 0.951
STM0294
Putative cytoplasmic protein.
      
 0.897
msgA
Macrophage survival gene; Affects survival in macrophages.
      
 0.670
glpC
Similar to E. coli sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit (AAC75303.1); Blastp hit to AAC75303.1 (396 aa), 94% identity in aa 1 - 395.
      
 0.514
STM2701
Fels-2 prophage protein; Similar to tail sheath proteins in phage P2.
  
  
 0.488
STM2707
Fels-2 prophage protein; Similar to tail fiber protein (gpH) in phage P2.
  
  
 0.488
STM4201
Putative phage tail protein.
  
  
 0.488
STM4213
Putative phage tail sheath protein.
  
  
 0.488
STM2708
Fels-2 prophage protein; Similar to tail fiber protein (gpI) in phage P2.
  
  
 0.481
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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