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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM2447Putative outer membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC75485.1); Blastp hit to AAC75485.1 (191 aa), 80% identity in aa 1 - 191. (191 aa)    
Predicted Functional Partners:
yfeZ
Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC75486.1); Blastp hit to AAC75486.1 (151 aa), 73% identity in aa 3 - 151.
  
    0.647
ypeA
Putative acetyltransferase; Similar to E. coli orf, hypothetical protein (AAC75487.1); Blastp hit to AAC75487.1 (178 aa), 85% identity in aa 1 - 178; Belongs to the acetyltransferase family. YpeA subfamily.
       0.635
STM2446
Putative iron-dependent peroxidase; Similar to E. coli orf, hypothetical protein (AAC75484.1); Blastp hit to AAC75484.1 (308 aa), 94% identity in aa 10 - 308.
  
    0.573
amiA
N-acetylmuramoyl-l-alanine amidase I; Cell-wall hydrolase involved in septum cleavage during cell division; Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family.
       0.446
hemF
Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
       0.446
ypfK
Putative inner membrane protein; Hypothetical protein in eutR-hemF intergenic region (ORF33). (SW:YPFK_SALTY).
       0.415
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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