STM2586 protein (Salmonella enterica Typhimurium)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

STM2586

Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi|2460256). (192 aa)

Predicted Functional Partners:

STM2587

0.932

STM2588

0.827

STM2589

0.646

STM2591

0.552

STM2590

0.538

STM2594

0.464

STM2598

0.433

STM2592

0.431

STM2597

0.415

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
STM2586	STM2587	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	0.932
STM2586	STM2588	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to tail fiber-like protein; similar to E. coli putative membrane protein (AAC74454.1); Blastp hit to AAC74454.1 (1122 aa), 49% identity in aa 3 - 515, 56% identity in aa 878 - 1084, 42% identity in aa 1008 - 1122, 33% identity in aa 354 - 568, 26-1073758628dentity in aa 116 - 345, 26% identity in aa 961 - 1111, 26-1073758654dentity in aa 940 - 1106, 25% identity in aa 766 - 828, 26% identity in aa 778 - 841.	0.827
STM2586	STM2589	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to host specificity protein-J in phage lambda.	0.646
STM2586	STM2590	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to tail assembly protein I in phage lambda.	0.538
STM2586	STM2591	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to tail assembly protein K in phage lambda.	0.552
STM2586	STM2592	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to phage tail component L.	0.431
STM2586	STM2594	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to phage tail component H; lambda phage H tail component homolog (gi\|2232364).	0.464
STM2586	STM2597	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to major tail protein.	0.415
STM2586	STM2598	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein.	0.433
STM2587	STM2586	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	0.932
STM2587	STM2588	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to tail fiber-like protein; similar to E. coli putative membrane protein (AAC74454.1); Blastp hit to AAC74454.1 (1122 aa), 49% identity in aa 3 - 515, 56% identity in aa 878 - 1084, 42% identity in aa 1008 - 1122, 33% identity in aa 354 - 568, 26-1073758628dentity in aa 116 - 345, 26% identity in aa 961 - 1111, 26-1073758654dentity in aa 940 - 1106, 25% identity in aa 766 - 828, 26% identity in aa 778 - 841.	0.787
STM2587	STM2589	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to host specificity protein-J in phage lambda.	0.540
STM2587	STM2590	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to tail assembly protein I in phage lambda.	0.506
STM2587	STM2591	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to tail assembly protein K in phage lambda.	0.498
STM2587	STM2592	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	Gifsy-1 prophage protein; Similar to phage tail component L.	0.454
STM2588	STM2586	Gifsy-1 prophage protein; Similar to tail fiber-like protein; similar to E. coli putative membrane protein (AAC74454.1); Blastp hit to AAC74454.1 (1122 aa), 49% identity in aa 3 - 515, 56% identity in aa 878 - 1084, 42% identity in aa 1008 - 1122, 33% identity in aa 354 - 568, 26-1073758628dentity in aa 116 - 345, 26% identity in aa 961 - 1111, 26-1073758654dentity in aa 940 - 1106, 25% identity in aa 766 - 828, 26% identity in aa 778 - 841.	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	0.827
STM2588	STM2587	Gifsy-1 prophage protein; Similar to tail fiber-like protein; similar to E. coli putative membrane protein (AAC74454.1); Blastp hit to AAC74454.1 (1122 aa), 49% identity in aa 3 - 515, 56% identity in aa 878 - 1084, 42% identity in aa 1008 - 1122, 33% identity in aa 354 - 568, 26-1073758628dentity in aa 116 - 345, 26% identity in aa 961 - 1111, 26-1073758654dentity in aa 940 - 1106, 25% identity in aa 766 - 828, 26% identity in aa 778 - 841.	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	0.787
STM2588	STM2589	Gifsy-1 prophage protein; Similar to tail fiber-like protein; similar to E. coli putative membrane protein (AAC74454.1); Blastp hit to AAC74454.1 (1122 aa), 49% identity in aa 3 - 515, 56% identity in aa 878 - 1084, 42% identity in aa 1008 - 1122, 33% identity in aa 354 - 568, 26-1073758628dentity in aa 116 - 345, 26% identity in aa 961 - 1111, 26-1073758654dentity in aa 940 - 1106, 25% identity in aa 766 - 828, 26% identity in aa 778 - 841.	Gifsy-1 prophage protein; Similar to host specificity protein-J in phage lambda.	0.428
STM2588	STM2590	Gifsy-1 prophage protein; Similar to tail fiber-like protein; similar to E. coli putative membrane protein (AAC74454.1); Blastp hit to AAC74454.1 (1122 aa), 49% identity in aa 3 - 515, 56% identity in aa 878 - 1084, 42% identity in aa 1008 - 1122, 33% identity in aa 354 - 568, 26-1073758628dentity in aa 116 - 345, 26% identity in aa 961 - 1111, 26-1073758654dentity in aa 940 - 1106, 25% identity in aa 766 - 828, 26% identity in aa 778 - 841.	Gifsy-1 prophage protein; Similar to tail assembly protein I in phage lambda.	0.422
STM2589	STM2586	Gifsy-1 prophage protein; Similar to host specificity protein-J in phage lambda.	Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi\|2460256).	0.646

page 1 of 4

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Textmining

Fusion

Experiments

Cooccurrence

Databases

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About