Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STM2586Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi|2460256). (192 aa)    
Predicted Functional Partners:
STM2587
Gifsy-1 prophage protein; Similar to phage tail assembly protein; phage tail assembly protein (gi|2460256).
  
    0.922
STM2588
Gifsy-1 prophage protein; Similar to tail fiber-like protein; similar to E. coli putative membrane protein (AAC74454.1); Blastp hit to AAC74454.1 (1122 aa), 49% identity in aa 3 - 515, 56% identity in aa 878 - 1084, 42% identity in aa 1008 - 1122, 33% identity in aa 354 - 568, 26-1073758628dentity in aa 116 - 345, 26% identity in aa 961 - 1111, 26-1073758654dentity in aa 940 - 1106, 25% identity in aa 766 - 828, 26% identity in aa 778 - 841.
  
    0.799
STM2589
Gifsy-1 prophage protein; Similar to host specificity protein-J in phage lambda.
  
    0.639
STM2591
Gifsy-1 prophage protein; Similar to tail assembly protein K in phage lambda.
  
    0.543
STM2590
Gifsy-1 prophage protein; Similar to tail assembly protein I in phage lambda.
  
    0.515
STM2598
Gifsy-1 prophage protein.
  
    0.443
STM2597
Gifsy-1 prophage protein; Similar to major tail protein.
  
    0.431
STM2592
Gifsy-1 prophage protein; Similar to phage tail component L.
  
    0.417
STM2594
Gifsy-1 prophage protein; Similar to phage tail component H; lambda phage H tail component homolog (gi|2232364).
  
    0.417
STM2707
Fels-2 prophage protein; Similar to tail fiber protein (gpH) in phage P2.
  
  
 0.402
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
Server load: medium (46%) [HD]