STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM2597Gifsy-1 prophage protein; Similar to major tail protein. (248 aa)    
Predicted Functional Partners:
STM2592
Gifsy-1 prophage protein; Similar to phage tail component L.
  
    0.964
STM2598
Gifsy-1 prophage protein.
  
    0.943
STM2605
Gifsy-1 prophage protein; Similar to head-tail preconnector gp5 of phage 21; similar to E. coli putative protease (AAC74354.1); Blastp hit to AAC74354.1 (349 aa), 27% identity in aa 124 - 300.
   
    0.939
STM2606
Gifsy-1 prophage protein; Similar to head-tail preconnector gp4 of phage 21.
  
    0.938
STM2608
Gifsy-1 prophage protein; Similar to terminase large chain gp2 of N15; similar to E. coli orf, hypothetical protein (AAC73662.1); Blastp hit to AAC73662.1 (247 aa), 53% identity in aa 7 - 132.
  
    0.932
STM2590
Gifsy-1 prophage protein; Similar to tail assembly protein I in phage lambda.
  
    0.931
STM2603
Gifsy-1 prophage protein; Similar to head protein gp7 of phage 21.
  
  
 0.907
STM2599
Gifsy-1 prophage protein; Similar to E. coli putative virulence protein (AAC74514.1); Blastp hit to AAC74514.1 (402 aa), 36% identity in aa 1 - 384.
  
    0.860
STM2596
Gifsy-1 prophage protein; Similar to minor tail protein.
  
    0.837
STM2589
Gifsy-1 prophage protein; Similar to host specificity protein-J in phage lambda.
  
    0.810
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.