Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STM2698Fels-2 prophage protein; Similar to gpE in phage P2. (39 aa)    
Predicted Functional Partners:
STM2699
Fels-2 prophage protein; Similar to genes in P2-like phages; unknown (gi|2852350).
  
    0.772
STM2696
Fels-2 prophage protein; Similar to genes in phage phiCTX.
  
    0.741
STM2720
Fels-2 prophage protein; Similar to gpN; major capsid in phage P2.
   
    0.732
STM2718
Fels-2 prophage protein; Similar to gpQ in phage 186.
  
    0.730
STM2701
Fels-2 prophage protein; Similar to tail sheath proteins in phage P2.
  
    0.726
STM2695
Fels-2 prophage protein; Similar to late control gene in phage.
  
    0.708
STM2721
Fels-2 prophage protein; Similar to gpO; capsid scaffold in phage P2.
   
    0.703
STM2723
Fels-2 prophage protein; Similar to gpQ; portal vector protein in phage P2.
   
    0.703
STM2709
Fels-2 prophage protein; Similar to gpJ; base plate of tail in phage P2.
  
    0.702
STM2708
Fels-2 prophage protein; Similar to tail fiber protein (gpI) in phage P2.
  
    0.683
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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