STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM2702Fels-2 prophage protein; Similar to te-specific recombinases; DNA invertase Pin homolog; similar to E. coli inversion of adjacent DNA; at locus of e14 element (AAC74242.1); Blastp hit to AAC74242.1 (184 aa), 88% identity in aa 3 - 180. (185 aa)    
Predicted Functional Partners:
STM2703
Fels-2 prophage protein; Similar to invertase (pin) in phage E14; unknown (gi|2852344).
  
  
 0.992
STM2729
Fels-2 prophage protein; Possible endonuclease which induces a single-strand cut and initiates DNA replication.
   
    0.985
STM2695
Fels-2 prophage protein; Similar to late control gene in phage.
  
    0.978
STM2696
Fels-2 prophage protein; Similar to genes in phage phiCTX.
  
    0.978
STM2712
Fels-2 prophage protein; Similar to gpR for completion of tail in phage P2.
   
    0.976
STM2721
Fels-2 prophage protein; Similar to gpO; capsid scaffold in phage P2.
   
    0.976
STM2701
Fels-2 prophage protein; Similar to tail sheath proteins in phage P2.
  
  
 0.970
STM2720
Fels-2 prophage protein; Similar to gpN; major capsid in phage P2.
   
    0.961
STM2709
Fels-2 prophage protein; Similar to gpJ; base plate of tail in phage P2.
   
  
 0.960
STM2710
Fels-2 prophage protein; Similar to gpV; base plate of tail in phage P2.
   
    0.958
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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