STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STM2703Fels-2 prophage protein; Similar to invertase (pin) in phage E14; unknown (gi|2852344). (359 aa)    
Predicted Functional Partners:
STM2702
Fels-2 prophage protein; Similar to te-specific recombinases; DNA invertase Pin homolog; similar to E. coli inversion of adjacent DNA; at locus of e14 element (AAC74242.1); Blastp hit to AAC74242.1 (184 aa), 88% identity in aa 3 - 180.
  
  
 0.992
STM2704
Fels-2 prophage protein; Similar to genes in P2-like phages; unknown (gi|2852345).
  
  
 0.964
STM0909
Fels-1 prophage protein.
  
  
 0.956
STM2739
Fels-2 prophage protein; Similar to int protein in phage 186; similar to E. coli prophage DLP12 integrase (AAC73638.1); Blastp hit to AAC73638.1 (387 aa), 41% identity in aa 302 - 363, 24% identity in aa 66 - 280, 35% identity in aa 19 - 50.
   
  
 0.910
STM2730
Fels-2 prophage protein; Similar to retron in E coli; similar to E. coli DNA adenine methylase (AAC76412.1); Blastp hit to AAC76412.1 (278 aa), 46% identity in aa 8 - 266.
  
    0.904
STM1054
Gifsy-2 prophage protein; Hypothetical protein (gi|5410523).
      
 0.868
STM2630
Gifsy-1 prophage protein; Hypothetical protein 4 (gi|7467265).
   
  
 0.857
STM2620
Gifsy-1 prophage protein.
      
 0.855
STM2769
Similar to E. coli IS3 putative transposase (AAC75150.1); Blastp hit to AAC75150.1 (288 aa), 84% identity in aa 1 - 288.
      
 0.853
STM2724
Fels-2 prophage protein.
   
    0.828
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.