STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM2732Fels-2 prophage protein; Similar to protein in phage 186. (77 aa)    
Predicted Functional Partners:
STM2731
Fels-2 prophage protein; Similar to protein in phage 186; similar to E. coli orf, hypothetical protein (AAC73890.1); Blastp hit to AAC73890.1 (88 aa), 42% identity in aa 9 - 76.
  
    0.986
STM2589
Gifsy-1 prophage protein; Similar to host specificity protein-J in phage lambda.
      
 0.950
STM4198
Putative cytoplasmic protein.
   
  
 0.950
STM1005
Gifsy-2 prophage integrase; Similar to E. coli putative transposase (AAC74651.1); Blastp hit to AAC74651.1 (398 aa), 54% identity in aa 2 - 393; Belongs to the 'phage' integrase family.
      
 0.938
STM2734
Fels-2 prophage protein.
  
    0.933
STM2729
Fels-2 prophage protein; Possible endonuclease which induces a single-strand cut and initiates DNA replication.
  
    0.920
STM2733
Fels-2 prophage protein; Similar to E. coli retron Ec67.
  
    0.910
STM2736
Fels-2 prophage protein; Similar to retron in E coli and to protein cII of phages.
  
    0.879
STM2730
Fels-2 prophage protein; Similar to retron in E coli; similar to E. coli DNA adenine methylase (AAC76412.1); Blastp hit to AAC76412.1 (278 aa), 46% identity in aa 8 - 266.
  
    0.871
STM2739
Fels-2 prophage protein; Similar to int protein in phage 186; similar to E. coli prophage DLP12 integrase (AAC73638.1); Blastp hit to AAC73638.1 (387 aa), 41% identity in aa 302 - 363, 24% identity in aa 66 - 280, 35% identity in aa 19 - 50.
   
    0.866
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.