STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM2733Fels-2 prophage protein; Similar to E. coli retron Ec67. (113 aa)    
Predicted Functional Partners:
STM2729
Fels-2 prophage protein; Possible endonuclease which induces a single-strand cut and initiates DNA replication.
  
    0.984
STM2739
Fels-2 prophage protein; Similar to int protein in phage 186; similar to E. coli prophage DLP12 integrase (AAC73638.1); Blastp hit to AAC73638.1 (387 aa), 41% identity in aa 302 - 363, 24% identity in aa 66 - 280, 35% identity in aa 19 - 50.
   
    0.977
STM2731
Fels-2 prophage protein; Similar to protein in phage 186; similar to E. coli orf, hypothetical protein (AAC73890.1); Blastp hit to AAC73890.1 (88 aa), 42% identity in aa 9 - 76.
  
    0.972
STM2720
Fels-2 prophage protein; Similar to gpN; major capsid in phage P2.
   
    0.965
STM2721
Fels-2 prophage protein; Similar to gpO; capsid scaffold in phage P2.
   
    0.959
STM2723
Fels-2 prophage protein; Similar to gpQ; portal vector protein in phage P2.
   
    0.958
STM2736
Fels-2 prophage protein; Similar to retron in E coli and to protein cII of phages.
  
    0.955
STM2718
Fels-2 prophage protein; Similar to gpQ in phage 186.
   
    0.942
STM2713
Fels-2 prophage protein; Similar to protein from phage CTX.
   
    0.941
STM2695
Fels-2 prophage protein; Similar to late control gene in phage.
   
    0.938
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.