Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
STM2742Putative cytoplasmic protein. (397 aa)    
Predicted Functional Partners:
STM2754
Putative hexulose 6 phosphate synthase.
   
    0.838
STM2761
Putative inner membrane protein.
   
    0.664
STM2767
Putative superfamily I DNA and RNA helicase.
   
    0.636
STM2763
Putative integrase; Similar to E. coli prophage CP4-57 integrase (AAC75670.1); Blastp hit to AAC75670.1 (413 aa), 47% identity in aa 1 - 185; Belongs to the 'phage' integrase family.
  
    0.544
oafA
Acetylation of the O-antigen (LPS); O-antigen five:.
   
    0.500
STM2740
Fels-2 prophage protein; Similar to int protein in phage CP4-57; similar to E. coli prophage CP4-57 integrase (AAC75670.1); Blastp hit to AAC75670.1 (413 aa), 47% identity in aa 1 - 341; Belongs to the 'phage' integrase family.
 
    0.493
STM4494
Putative ABC-type sugar/spermidine/putrescine transport systems, ATPase component.
  
    0.423
STM4495
Putative type II restriction enzyme, methylase subunit.
   
    0.419
hsdS
Specificity determinant for hsdM and hsdR; The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to the same target sequence but cutting the DNA some distance from this site. Whether the DNA is cut or modified depends on the methylation state of the target sequence. When the target site is unmodified, the DNA is cut. When the target site is hemimethylated, the complex acts as a maintenance M [...]
  
    0.418
STM2766
Putative cytoplasmic protein.
   
    0.417
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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