Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STM2766Putative cytoplasmic protein. (212 aa)    
Predicted Functional Partners:
STM2767
Putative superfamily I DNA and RNA helicase.
  
    0.945
STM2761
Putative inner membrane protein.
   
    0.666
STM2746
Putative excinuclease ATPase subunit.
   
    0.657
STM2747
Putative cytoplasmic protein.
   
    0.539
STM2769
Similar to E. coli IS3 putative transposase (AAC75150.1); Blastp hit to AAC75150.1 (288 aa), 84% identity in aa 1 - 288.
  
    0.449
STM2762
Putative inner membrane protein.
   
    0.447
STM2768
Putative transposase; Similar to E. coli orf, hypothetical protein (AAC75149.1); Blastp hit to AAC75149.1 (102 aa), 85% identity in aa 4 - 102.
  
    0.447
STM2742
Putative cytoplasmic protein.
   
    0.417
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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