| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| arcB | fhlA | STM3328 | STM2859 | Sensory histidine kinase in two-component regulatory system with ArcA; Senses redox conditions; similar to E. coli aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA (AAC76242.1); Blastp hit to AAC76242.1 (776 aa), 93% identity in aa 1 - 776. | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | 0.665 |
| arcB | gltB | STM3328 | STM3330 | Sensory histidine kinase in two-component regulatory system with ArcA; Senses redox conditions; similar to E. coli aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA (AAC76242.1); Blastp hit to AAC76242.1 (776 aa), 93% identity in aa 1 - 776. | Similar to E. coli glutamate synthase, large subunit (AAC76244.1); Blastp hit to AAC76244.1 (1517 aa), 95% identity in aa 32 - 1517. | 0.704 |
| arcB | hfq | STM3328 | STM4361 | Sensory histidine kinase in two-component regulatory system with ArcA; Senses redox conditions; similar to E. coli aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA (AAC76242.1); Blastp hit to AAC76242.1 (776 aa), 93% identity in aa 1 - 776. | Host factor I for bacteriophage Q beta replication; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (By similarity). Plays a central regulatory role in the microbial response to space flight conditions. Is essential for virulence and is required for efficient invasion of non-phagocytic cells. | 0.500 |
| arcB | rpoN | STM3328 | STM3320 | Sensory histidine kinase in two-component regulatory system with ArcA; Senses redox conditions; similar to E. coli aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA (AAC76242.1); Blastp hit to AAC76242.1 (776 aa), 93% identity in aa 1 - 776. | Sigma N factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is responsible for the expression of enzymes involved in arginine catabolism. The open complex (sigma-54 and core RNA polymerase) serves as the receptor for the receipt of the melting signal from the remotely bound activator protein GlnG(NtrC). | 0.548 |
| arcB | rpoS | STM3328 | STM2924 | Sensory histidine kinase in two-component regulatory system with ArcA; Senses redox conditions; similar to E. coli aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA (AAC76242.1); Blastp hit to AAC76242.1 (776 aa), 93% identity in aa 1 - 776. | Sigma S (sigma 38) factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.566 |
| arcB | ttrS | STM3328 | STM1386 | Sensory histidine kinase in two-component regulatory system with ArcA; Senses redox conditions; similar to E. coli aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA (AAC76242.1); Blastp hit to AAC76242.1 (776 aa), 93% identity in aa 1 - 776. | Tetrathionate reductase complex: sensory transduction histidine kinase; Member of the two-component regulatory system TtrR/TtrS, which is required for synthesis of tetrathionate reductase. Probably functions as a sensor protein kinase which is autophosphorylated at a histidine residue in response to tetrathionate, and transfers its phosphate group to TtrR. During mice infection, the ability to use tetrathionate as an electron acceptor is a growth advantage for S.typhimurium over the competing microbiota in the lumen of the inflamed gut. | 0.822 |
| fhlA | arcB | STM2859 | STM3328 | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | Sensory histidine kinase in two-component regulatory system with ArcA; Senses redox conditions; similar to E. coli aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA (AAC76242.1); Blastp hit to AAC76242.1 (776 aa), 93% identity in aa 1 - 776. | 0.665 |
| fhlA | gltB | STM2859 | STM3330 | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | Similar to E. coli glutamate synthase, large subunit (AAC76244.1); Blastp hit to AAC76244.1 (1517 aa), 95% identity in aa 32 - 1517. | 0.653 |
| fhlA | hfq | STM2859 | STM4361 | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | Host factor I for bacteriophage Q beta replication; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (By similarity). Plays a central regulatory role in the microbial response to space flight conditions. Is essential for virulence and is required for efficient invasion of non-phagocytic cells. | 0.773 |
| fhlA | hycC | STM2859 | STM2851 | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | Hydrogenase 3, membrane subunit; Part of FHL complex; similar to E. coli membrane-spanning protein of hydrogenase 3 (part of FHL complex) (AAC75765.1); Blastp hit to AAC75765.1 (608 aa), 88% identity in aa 1 - 608. | 0.665 |
| fhlA | hycG | STM2859 | STM2847 | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | Similar to E. coli hydrogenase activity (AAC75761.1); Blastp hit to AAC75761.1 (255 aa), 96% identity in aa 1 - 255. | 0.881 |
| fhlA | hycI | STM2859 | STM2845 | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | Similar to E. coli protease involved in processing C-terminal end of the large subunit of hydrogenase 3 (AAC75759.1); Blastp hit to AAC75759.1 (156 aa), 91% identity in aa 1 - 155. | 0.737 |
| fhlA | hypE | STM2859 | STM2858 | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | Putative hydrogenase expression/formation protein; Similar to E. coli plays structural role in maturation of all 3 hydrogenases (AAC75772.1); Blastp hit to AAC75772.1 (322 aa), 91% identity in aa 1 - 322. | 0.790 |
| fhlA | rpoN | STM2859 | STM3320 | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | Sigma N factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is responsible for the expression of enzymes involved in arginine catabolism. The open complex (sigma-54 and core RNA polymerase) serves as the receptor for the receipt of the melting signal from the remotely bound activator protein GlnG(NtrC). | 0.836 |
| fhlA | rpoS | STM2859 | STM2924 | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | Sigma S (sigma 38) factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.727 |
| fhlA | ttrS | STM2859 | STM1386 | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | Tetrathionate reductase complex: sensory transduction histidine kinase; Member of the two-component regulatory system TtrR/TtrS, which is required for synthesis of tetrathionate reductase. Probably functions as a sensor protein kinase which is autophosphorylated at a histidine residue in response to tetrathionate, and transfers its phosphate group to TtrR. During mice infection, the ability to use tetrathionate as an electron acceptor is a growth advantage for S.typhimurium over the competing microbiota in the lumen of the inflamed gut. | 0.703 |
| gltB | arcB | STM3330 | STM3328 | Similar to E. coli glutamate synthase, large subunit (AAC76244.1); Blastp hit to AAC76244.1 (1517 aa), 95% identity in aa 32 - 1517. | Sensory histidine kinase in two-component regulatory system with ArcA; Senses redox conditions; similar to E. coli aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA (AAC76242.1); Blastp hit to AAC76242.1 (776 aa), 93% identity in aa 1 - 776. | 0.704 |
| gltB | fhlA | STM3330 | STM2859 | Similar to E. coli glutamate synthase, large subunit (AAC76244.1); Blastp hit to AAC76244.1 (1517 aa), 95% identity in aa 32 - 1517. | Formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; Required for induction of expression of the formate dehydrogenase H and hydrogenase-3 structural genes. | 0.653 |
| gltB | hfq | STM3330 | STM4361 | Similar to E. coli glutamate synthase, large subunit (AAC76244.1); Blastp hit to AAC76244.1 (1517 aa), 95% identity in aa 32 - 1517. | Host factor I for bacteriophage Q beta replication; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (By similarity). Plays a central regulatory role in the microbial response to space flight conditions. Is essential for virulence and is required for efficient invasion of non-phagocytic cells. | 0.523 |
| gltB | rpoN | STM3330 | STM3320 | Similar to E. coli glutamate synthase, large subunit (AAC76244.1); Blastp hit to AAC76244.1 (1517 aa), 95% identity in aa 32 - 1517. | Sigma N factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is responsible for the expression of enzymes involved in arginine catabolism. The open complex (sigma-54 and core RNA polymerase) serves as the receptor for the receipt of the melting signal from the remotely bound activator protein GlnG(NtrC). | 0.459 |