Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| araA | fucA | STM0102 | STM2974 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.471 |
| araA | fucI | STM0102 | STM2976 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.495 |
| araA | fucK | STM0102 | STM2977 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | 0.703 |
| araA | fucO | STM0102 | STM2973 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Similar to E. coli L-1,2-propanediol oxidoreductase (AAC75841.1); Blastp hit to AAC75841.1 (383 aa), 91% identity in aa 2 - 383. | 0.541 |
| araA | rhaA | STM0102 | STM4046 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-rhamnose isomerase. (SW:RHAA_SALTY). | 0.610 |
| araA | rhaD | STM0102 | STM4045 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. | 0.615 |
| araA | xylA | STM0102 | STM3661 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Similar to E. coli D-xylose isomerase (AAC76589.1); Blastp hit to AAC76589.1 (440 aa), 92% identity in aa 1 - 440. | 0.936 |
| fucA | araA | STM2974 | STM0102 | L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.471 |
| fucA | fucI | STM2974 | STM2976 | L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.720 |
| fucA | fucK | STM2974 | STM2977 | L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | 0.985 |
| fucA | fucO | STM2974 | STM2973 | L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | Similar to E. coli L-1,2-propanediol oxidoreductase (AAC75841.1); Blastp hit to AAC75841.1 (383 aa), 91% identity in aa 2 - 383. | 0.851 |
| fucA | fucR | STM2974 | STM2979 | L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | DeoR family; similar to E. coli positive regulator of the fuc operon (AAC75847.1); Blastp hit to AAC75847.1 (243 aa), 88% identity in aa 1 - 235. | 0.621 |
| fucA | fucU | STM2974 | STM2978 | L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | Conserved protein of fucose operon; Involved in the anomeric conversion of L-fucose. | 0.753 |
| fucA | rhaA | STM2974 | STM4046 | L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | L-rhamnose isomerase. (SW:RHAA_SALTY). | 0.639 |
| fucA | rhaD | STM2974 | STM4045 | L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. | 0.973 |
| fucI | araA | STM2976 | STM0102 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.495 |
| fucI | fucA | STM2976 | STM2974 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | L-fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.720 |
| fucI | fucK | STM2976 | STM2977 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | 0.997 |
| fucI | fucO | STM2976 | STM2973 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Similar to E. coli L-1,2-propanediol oxidoreductase (AAC75841.1); Blastp hit to AAC75841.1 (383 aa), 91% identity in aa 2 - 383. | 0.552 |
| fucI | fucR | STM2976 | STM2979 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | DeoR family; similar to E. coli positive regulator of the fuc operon (AAC75847.1); Blastp hit to AAC75847.1 (243 aa), 88% identity in aa 1 - 235. | 0.558 |
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