STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yqhE2,5-diketo-D-gluconate reductase A; Catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG). (275 aa)    
Predicted Functional Partners:
yqhD
Putative alcohol dehydrogenase; Similar to E. coli putative oxidoreductase (AAC76047.1); Blastp hit to AAC76047.1 (387 aa), 88% identity in aa 1 - 387.
  
  
 0.778
yqhC
Putative AraC/XylS family transcriptional regulator; Similar to E. coli putative ARAC-type regulatory protein (AAC76046.1); Blastp hit to AAC76046.1 (375 aa), 83% identity in aa 72 - 375.
  
  
 0.767
yhdN
Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC76318.1); Blastp hit to AAC76318.1 (122 aa), 86% identity in aa 1 - 122.
   
  
 0.673
yeaG
Putative Ser protein kinase; Similar to E. coli orf, hypothetical protein (AAC74853.1); Blastp hit to AAC74853.1 (644 aa), 98% identity in aa 1 - 644.
   
    0.662
poxB
Pyruvate dehydrogenase/oxidase FAD and thiamine PPi cofactors, cytoplasmic in absence of cofactors; Similar to E. coli pyruvate oxidase (AAC73958.1); Blastp hit to AAC73958.1 (572 aa), 94% identity in aa 1 - 572; Belongs to the TPP enzyme family.
   
    0.601
yafB
2,5-diketo-D-gluconate reductase B; Catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG).
  
  
0.585
yqjD
Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC76133.1); Blastp hit to AAC76133.1 (101 aa), 90% identity in aa 1 - 101.
   
    0.583
ydiZ
Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC74794.1); Blastp hit to AAC74794.1 (96 aa), 69% identity in aa 1 - 94.
   
    0.582
msyB
Similar to E. coli acidic protein suppresses mutants lacking function of protein export (AAC74135.1); Blastp hit to AAC74135.1 (125 aa), 92% identity in aa 2 - 125.
   
    0.559
ugpB
Sn-glycerol 3-phosphate transport protein; sn-glycerol-3-phosphate and glycerophosphoryl diester-binding protein interacts with the binding protein-dependent transport system UgpACE.
   
  
 0.540
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.