STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygjTPutative resistance protein; Has been proposed to be a redox modulator. Belongs to the TerC family. (322 aa)    
Predicted Functional Partners:
yebN
Putative YebN family transport protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
   
  
 0.706
ygjU
Putative dicarboxylate permease; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
     
 0.514
yccT
Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC74050.1); Blastp hit to AAC74050.1 (220 aa), 84% identity in aa 1 - 220; Belongs to the UPF0319 family.
      
 0.497
yabI
Putative DedA family membrane protein; Similar to E. coli orf, hypothetical protein (AAC73176.1); Blastp hit to AAC73176.1 (254 aa), 89% identity in aa 1 - 253.
  
  
 0.465
ybaB
Putative cytoplasmic protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
      
 0.455
yncJ
Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC74518.1); Blastp hit to AAC74518.1 (76 aa), 76% identity in aa 1 - 73.
      
 0.452
yhfC
Putative MFS family transport protein; Similar to E. coli putative transport (AAC76389.1); Blastp hit to AAC76389.1 (393 aa), 90% identity in aa 1 - 393.
   
  
 0.451
ynfM
Similar to E. coli putative transport protein (AAC74668.1); Blastp hit to AAC74668.1 (417 aa), 91% identity in aa 1 - 417.
      
 0.450
ygjR
Putative dehydrogenase; Similar to E. coli orf, hypothetical protein (AAC76122.1); Blastp hit to AAC76122.1 (334 aa), 83% identity in aa 7 - 332.
       0.432
htpX
Heat shock protein; Integral membrane protein; similar to E. coli heat shock protein, integral membrane protein (AAC74899.1); Blastp hit to AAC74899.1 (293 aa), 96% identity in aa 1 - 293; Belongs to the peptidase M48B family.
     
 0.427
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.