STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yqjFPutative membrane-associated protein; Similar to E. coli orf, hypothetical protein (AAC76136.1); Blastp hit to AAC76136.1 (160 aa), 81% identity in aa 1 - 160. (161 aa)    
Predicted Functional Partners:
yhaK
Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC76141.1); Blastp hit to AAC76141.1 (233 aa), 84% identity in aa 1 - 233; Belongs to the pirin family.
  
  
 0.892
yhhW
Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC76464.1); Blastp hit to AAC76464.1 (231 aa), 93% identity in aa 1 - 231; Belongs to the pirin family.
  
  
 0.886
yhaJ
Similar to E. coli putative transcriptional regulator LYSR-type (AAC76140.1); Blastp hit to AAC76140.1 (298 aa), 96% identity in aa 1 - 298; Belongs to the LysR transcriptional regulatory family.
  
   
 0.872
ybiJ
Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73889.1); Blastp hit to AAC73889.1 (86 aa), 80% identity in aa 1 - 86.
   
  
 0.854
ugpQ
Similar to E. coli glycerophosphodiester phosphodiesterase, cytosolic (AAC76474.1); Blastp hit to AAC76474.1 (247 aa), 87% identity in aa 1 - 244.
   
  
 0.819
yqjG
Putative glutathione S-transferase; Similar to E. coli putative transferase (AAC76137.1); Blastp hit to AAC76137.1 (328 aa), 92% identity in aa 1 - 328.
  
    0.696
yqgB
Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC75976.1); Blastp hit to AAC75976.1 (48 aa), 73% identity in aa 6 - 46.
      
 0.592
purD
GAR synthetase; phosphoribosylamine--glycine ligase. (SW:PUR2_SALTY); Belongs to the GARS family.
     
 0.534
yqjD
Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC76133.1); Blastp hit to AAC76133.1 (101 aa), 90% identity in aa 1 - 101.
  
    0.512
yqjE
Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC76134.1); Blastp hit to AAC76134.1 (134 aa), 89% identity in aa 1 - 130.
  
    0.508
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.