Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yhiISimilar to E. coli putative membrane protein (AAC76512.1); Blastp hit to AAC76512.1 (355 aa), 87% identity in aa 1 - 355. (355 aa)    
Predicted Functional Partners:
yhiH
Putative ABC-type multidrug transport system; ATPase component; Permease component of an ABC-transporter; similar to E. coli putative ATP-binding component of a transport system, fragment 1 (AAC76511.1); Blastp hit to AAC76511.1 (894 aa), 89% identity in aa 1 - 894.
  
 0.982
yhhJ
Putative ABC superfamily transport protein; Atp_bind/membrane; similar to E. coli putative transporter (AAC76510.1); Blastp hit to AAC76510.1 (375 aa), 92% identity in aa 2 - 375.
 
  
 0.968
ybhS
Putative ABC superfamily (membrane) transport protein; Similar to E. coli orf, hypothetical protein (AAC73880.1); Blastp hit to AAC73880.1 (377 aa), 94% identity in aa 6 - 377.
 
  
 0.772
yqgB
Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC75976.1); Blastp hit to AAC75976.1 (48 aa), 73% identity in aa 6 - 46.
      
 0.740
ybhF
Putative ABC-type multidrug transport system, ATPase component; Similar to E. coli putative ATP-binding component of a transport system (AAC73881.1); Blastp hit to AAC73881.1 (583 aa), 91% identity in aa 6 - 583.
 
   
 0.732
yhcR
Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC76274.1); Blastp hit to AAC76274.1 (90 aa), 98% identity in aa 24 - 90.
   
  
 0.729
ydgF
Putative membrane transporter of cations and cationic drugs; Catalyzes the excretion of spermidine.
   
  
 0.728
yjeH
Putative transporter; Cytoplasmic membrane protein; similar to E. coli putative transport (AAC77101.1); Blastp hit to AAC77101.1 (418 aa), 71% identity in aa 1 - 410.
   
  
 0.727
ytgA
Putative inner membrane protein; Hypothetical 17.8 kKa protein in miaE 3'region (ORF 17.8). (SW:YTGA_SALTY).
      
 0.726
yajO
Putative oxidoreductase / K + channel protein; Similar to E. coli putative NAD(P)H-dependent xylose reductase (AAC73522.1); Blastp hit to AAC73522.1 (348 aa), 92% identity in aa 25 - 348.
   
  
 0.721
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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