STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STM3736Similar to E. coli putative transcriptional regulator LYSR-type (AAC73730.1); Blastp hit to AAC73730.1 (266 aa), 25% identity in aa 2 - 219; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
STM0030
Putative LysR family transcriptional regulator; leuO homolog (gi|6650098); Belongs to the LysR transcriptional regulatory family.
  
    0.774
STM0014
Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.
  
     0.749
leuO
Putative LysR family transcriptional regulator; Probable activator protein in leuabcd operon. (SW:LEUO_SALTY); Belongs to the LysR transcriptional regulatory family.
  
    0.704
STM3737
Putative Zn-dependent hydrolase; Including glyoxylases; similar to E. coli orf, hypothetical protein (AAC74013.1); Blastp hit to AAC74013.1 (215 aa), 28% identity in aa 28 - 135.
  
    0.614
STM3098
Putative transcriptional regulator.
  
    0.526
apeE
Outer membrane N-acetyl phenylalanine beta-naphthyl ester-cleaving esterase; Outer membrane esterase (gi|2896133).
  
    0.488
STM0907
Putative Fels-1 prophage chitinase.
  
     0.411
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.