STM3752 protein (Salmonella enterica Typhimurium)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

STM3752

Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3. (114 aa)

Predicted Functional Partners:

STM3754

0.933

rhuM

0.901

sugR

0.897

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
STM3752	STM3754	STM3752	STM3754	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3.	Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	0.933
STM3752	rhuM	STM3752	STM3755	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3.	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; RhuM (gi\|4324608).	0.901
STM3752	sugR	STM3752	STM3753	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3.	ATP binding protein; Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	0.897
STM3754	STM3752	STM3754	STM3752	Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3.	0.933
STM3754	rhuM	STM3754	STM3755	Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; RhuM (gi\|4324608).	0.940
STM3754	sugR	STM3754	STM3753	Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	ATP binding protein; Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	0.974
rhuM	STM3752	STM3755	STM3752	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; RhuM (gi\|4324608).	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3.	0.901
rhuM	STM3754	STM3755	STM3754	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; RhuM (gi\|4324608).	Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	0.940
rhuM	sugR	STM3755	STM3753	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; RhuM (gi\|4324608).	ATP binding protein; Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	0.967
sugR	STM3752	STM3753	STM3752	ATP binding protein; Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3.	0.897
sugR	STM3754	STM3753	STM3754	ATP binding protein; Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	0.974
sugR	rhuM	STM3753	STM3755	ATP binding protein; Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; putative ATP binding protein SugR (gi\|4324607).	Putative cytoplasmic protein; Pathogenicity island encoded protein: SPI3; RhuM (gi\|4324608).	0.967

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Textmining

Cooccurrence

Experiments

Coexpression

Databases

Fusion

© STRING Consortium 2025

Credits

Access

Info

About