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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yieHSimilar to E. coli putative phosphatase (AAC76738.1); Blastp hit to AAC76738.1 (221 aa), 81% identity in aa 1 - 220. (221 aa)    
Predicted Functional Partners:
yjjG
Putative haloacid dehalogenase-like hydrolase; Similar to E. coli putative phosphatase (AAC77327.1); Blastp hit to AAC77327.1 (225 aa), 91% identity in aa 1 - 225.
    
 
 0.952
yrfG
Similar to E. coli putative phosphatase (AAC76424.1); Blastp hit to AAC76424.1 (237 aa), 85% identity in aa 16 - 237.
    
 
 0.941
yieG
Putative xanthine/uracil permeases family; Similar to E. coli putative membrane / transport protein (AAC76737.1); Blastp hit to AAC76737.1 (445 aa), 96% identity in aa 1 - 445.
  
    0.787
STM4540
Putative glucosamine-fructose-6-phosphate aminotransferase; Similar to E. coli putative transport protein (AAC76396.1); Blastp hit to AAC76396.1 (347 aa), 26% identity in aa 42 - 341.
     
 0.764
STM0572
Putative phosphosugar isomerases; Similar to E. coli putative transport protein (AAC76396.1); Blastp hit to AAC76396.1 (347 aa), 27% identity in aa 42 - 299.
     
 0.763
yniC
Similar to E. coli putative phosphatase (AAC74797.1); Blastp hit to AAC74797.1 (222 aa), 90% identity in aa 1 - 222.
  
     0.720
solA
Putative sarcosine oxidase; Catalyzes the oxidative demethylation of N-methyl-L- tryptophan; Belongs to the MSOX/MTOX family. MTOX subfamily.
     
 0.702
yohG
Putative outer membrane efflux protein; Similar to E. coli putative channel/filament proteins (AAC75199.1); Blastp hit to AAC75199.1 (398 aa), 85% identity in aa 1 - 396.
      
 0.697
phoU
Regulatory gene for high affinity phosphate uptake; Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions.
     
 0.581
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
  
  
 0.491
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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