Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| STM4191 | STM4192 | STM4191 | STM4192 | Putative cytoplasmic protein. | Putative cytoplasmic protein; Similar to E. coli nucleoprotein/polynucleotide-associated enzyme (AAC73457.1); Blastp hit to AAC73457.1 (218 aa), 86% identity in aa 40 - 218. | 0.682 |
| STM4191 | pepE | STM4191 | STM4190 | Putative cytoplasmic protein. | (alpha)-aspartyl dipeptidase; Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids. | 0.558 |
| STM4191 | yjbC | STM4191 | STM4193 | Putative cytoplasmic protein. | Putative pseudouridine synthase; Dual specificity enzyme that catalyzes the synthesis of pseudouridine from uracil-2604 in 23S ribosomal RNA and from uracil-35 in the anticodon of tRNA(Tyr); Belongs to the pseudouridine synthase RsuA family. | 0.583 |
| STM4192 | STM4191 | STM4192 | STM4191 | Putative cytoplasmic protein; Similar to E. coli nucleoprotein/polynucleotide-associated enzyme (AAC73457.1); Blastp hit to AAC73457.1 (218 aa), 86% identity in aa 40 - 218. | Putative cytoplasmic protein. | 0.682 |
| STM4192 | pepE | STM4192 | STM4190 | Putative cytoplasmic protein; Similar to E. coli nucleoprotein/polynucleotide-associated enzyme (AAC73457.1); Blastp hit to AAC73457.1 (218 aa), 86% identity in aa 40 - 218. | (alpha)-aspartyl dipeptidase; Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids. | 0.498 |
| STM4192 | yjbC | STM4192 | STM4193 | Putative cytoplasmic protein; Similar to E. coli nucleoprotein/polynucleotide-associated enzyme (AAC73457.1); Blastp hit to AAC73457.1 (218 aa), 86% identity in aa 40 - 218. | Putative pseudouridine synthase; Dual specificity enzyme that catalyzes the synthesis of pseudouridine from uracil-2604 in 23S ribosomal RNA and from uracil-35 in the anticodon of tRNA(Tyr); Belongs to the pseudouridine synthase RsuA family. | 0.713 |
| pepE | STM4191 | STM4190 | STM4191 | (alpha)-aspartyl dipeptidase; Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids. | Putative cytoplasmic protein. | 0.558 |
| pepE | STM4192 | STM4190 | STM4192 | (alpha)-aspartyl dipeptidase; Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids. | Putative cytoplasmic protein; Similar to E. coli nucleoprotein/polynucleotide-associated enzyme (AAC73457.1); Blastp hit to AAC73457.1 (218 aa), 86% identity in aa 40 - 218. | 0.498 |
| pepE | yjbC | STM4190 | STM4193 | (alpha)-aspartyl dipeptidase; Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids. | Putative pseudouridine synthase; Dual specificity enzyme that catalyzes the synthesis of pseudouridine from uracil-2604 in 23S ribosomal RNA and from uracil-35 in the anticodon of tRNA(Tyr); Belongs to the pseudouridine synthase RsuA family. | 0.432 |
| yjbC | STM4191 | STM4193 | STM4191 | Putative pseudouridine synthase; Dual specificity enzyme that catalyzes the synthesis of pseudouridine from uracil-2604 in 23S ribosomal RNA and from uracil-35 in the anticodon of tRNA(Tyr); Belongs to the pseudouridine synthase RsuA family. | Putative cytoplasmic protein. | 0.583 |
| yjbC | STM4192 | STM4193 | STM4192 | Putative pseudouridine synthase; Dual specificity enzyme that catalyzes the synthesis of pseudouridine from uracil-2604 in 23S ribosomal RNA and from uracil-35 in the anticodon of tRNA(Tyr); Belongs to the pseudouridine synthase RsuA family. | Putative cytoplasmic protein; Similar to E. coli nucleoprotein/polynucleotide-associated enzyme (AAC73457.1); Blastp hit to AAC73457.1 (218 aa), 86% identity in aa 40 - 218. | 0.713 |
| yjbC | pepE | STM4193 | STM4190 | Putative pseudouridine synthase; Dual specificity enzyme that catalyzes the synthesis of pseudouridine from uracil-2604 in 23S ribosomal RNA and from uracil-35 in the anticodon of tRNA(Tyr); Belongs to the pseudouridine synthase RsuA family. | (alpha)-aspartyl dipeptidase; Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids. | 0.432 |