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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM4204Putative inner membrane protein. (515 aa)    
Predicted Functional Partners:
STM4205
Putative phage glycosyltransferase; Similar to E. coli putative glycan biosynthesis enzyme (AAC75410.1); Blastp hit to AAC75410.1 (306 aa), 80% identity in aa 1 - 305.
 
  
 0.998
yfdH
Similar to E. coli putative glycan biosynthesis enzyme (AAC75410.1); Blastp hit to AAC75410.1 (306 aa), 88% identity in aa 1 - 306.
 
  
 0.913
STM2208
Putative inner membrane protein.
   
  
 0.894
STM2209
Putative inner membrane protein.
      
 0.894
STM4206
Putative phage glucose translocase; Involved in O antigen modification. Involved in the translocation of bactoprenol-linked glucose across the cytoplasmic membrane.
  
    0.843
STM4201
Putative phage tail protein.
  
    0.695
STM4202
Putative phage baseplate protein.
  
    0.685
STM4199
Putative cytoplasmic protein.
  
    0.669
STM4203
Putative phage baseplate protein.
  
    0.647
STM4210
Putative methyl-accepting chemotaxis protein.
  
    0.626
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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