STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STM4209Putative inner membrane protein. (69 aa)    
Predicted Functional Partners:
STM4210
Putative methyl-accepting chemotaxis protein.
  
 
 0.944
STM4208
Putative cytoplasmic protein.
  
  
 0.854
STM4207
Putative phage baseplate component.
  
  
 0.851
STM4211
Putative phage tail protein.
  
    0.831
STM4201
Putative phage tail protein.
  
 
 0.760
STM4212
Putative phage tail core protein.
  
   0.730
STM4203
Putative phage baseplate protein.
  
 
 0.696
STM4202
Putative phage baseplate protein.
  
 
 0.681
STM2707
Fels-2 prophage protein; Similar to tail fiber protein (gpH) in phage P2.
  
 
 0.637
STM4199
Putative cytoplasmic protein.
  
    0.633
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.