yjbO protein (Salmonella enterica Typhimurium)

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yjbO

Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150. (80 aa)

Predicted Functional Partners:

ybfA

0.895

fxsA

0.856

yjbN

0.749

pspC

0.719

marT

0.680

pspA

0.575

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
fxsA	ybfA	STM4327	STM0708	Suppresses F exclusion of bacteriophage T7; Similar to E. coli orf, hypothetical protein (AAC77100.1); Blastp hit to AAC77100.1 (125 aa), 92% identity in aa 1 - 125.	Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73793.1); Blastp hit to AAC73793.1 (68 aa), 82% identity in aa 1 - 68.	0.673
fxsA	yjbO	STM4327	STM4244	Suppresses F exclusion of bacteriophage T7; Similar to E. coli orf, hypothetical protein (AAC77100.1); Blastp hit to AAC77100.1 (125 aa), 92% identity in aa 1 - 125.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	0.856
marT	yjbO	STM3759	STM4244	Pathogenicity island encoded protein: SPI3; putative transcriptional regulator MarT (gi\|4324612).	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	0.680
pspA	pspC	STM1690	STM1688	Phage shock protein; Negative regulatory gene for the psp opreon; similar to E. coli phage shock protein, inner membrane protein (AAC74386.1); Blastp hit to AAC74386.1 (222 aa), 91% identity in aa 1 - 222.	Phage shock protein; Regulatory gene; activates expression of psp operon with PspB; similar to E. coli phage shock protein: activates phage shock-protein expression (AAC74388.1); Blastp hit to AAC74388.1 (119 aa), 84% identity in aa 1 - 119.	0.999
pspA	yjbO	STM1690	STM4244	Phage shock protein; Negative regulatory gene for the psp opreon; similar to E. coli phage shock protein, inner membrane protein (AAC74386.1); Blastp hit to AAC74386.1 (222 aa), 91% identity in aa 1 - 222.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	0.575
pspC	pspA	STM1688	STM1690	Phage shock protein; Regulatory gene; activates expression of psp operon with PspB; similar to E. coli phage shock protein: activates phage shock-protein expression (AAC74388.1); Blastp hit to AAC74388.1 (119 aa), 84% identity in aa 1 - 119.	Phage shock protein; Negative regulatory gene for the psp opreon; similar to E. coli phage shock protein, inner membrane protein (AAC74386.1); Blastp hit to AAC74386.1 (222 aa), 91% identity in aa 1 - 222.	0.999
pspC	yjbO	STM1688	STM4244	Phage shock protein; Regulatory gene; activates expression of psp operon with PspB; similar to E. coli phage shock protein: activates phage shock-protein expression (AAC74388.1); Blastp hit to AAC74388.1 (119 aa), 84% identity in aa 1 - 119.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	0.719
ybfA	fxsA	STM0708	STM4327	Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73793.1); Blastp hit to AAC73793.1 (68 aa), 82% identity in aa 1 - 68.	Suppresses F exclusion of bacteriophage T7; Similar to E. coli orf, hypothetical protein (AAC77100.1); Blastp hit to AAC77100.1 (125 aa), 92% identity in aa 1 - 125.	0.673
ybfA	yjbO	STM0708	STM4244	Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73793.1); Blastp hit to AAC73793.1 (68 aa), 82% identity in aa 1 - 68.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	0.895
yjbN	yjbO	STM4243	STM4244	Putative TIM-barrel enzyme; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	0.749
yjbO	fxsA	STM4244	STM4327	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	Suppresses F exclusion of bacteriophage T7; Similar to E. coli orf, hypothetical protein (AAC77100.1); Blastp hit to AAC77100.1 (125 aa), 92% identity in aa 1 - 125.	0.856
yjbO	marT	STM4244	STM3759	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	Pathogenicity island encoded protein: SPI3; putative transcriptional regulator MarT (gi\|4324612).	0.680
yjbO	pspA	STM4244	STM1690	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	Phage shock protein; Negative regulatory gene for the psp opreon; similar to E. coli phage shock protein, inner membrane protein (AAC74386.1); Blastp hit to AAC74386.1 (222 aa), 91% identity in aa 1 - 222.	0.575
yjbO	pspC	STM4244	STM1688	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	Phage shock protein; Regulatory gene; activates expression of psp operon with PspB; similar to E. coli phage shock protein: activates phage shock-protein expression (AAC74388.1); Blastp hit to AAC74388.1 (119 aa), 84% identity in aa 1 - 119.	0.719
yjbO	ybfA	STM4244	STM0708	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73793.1); Blastp hit to AAC73793.1 (68 aa), 82% identity in aa 1 - 68.	0.895
yjbO	yjbN	STM4244	STM4243	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC77020.1); Blastp hit to AAC77020.1 (150 aa), 82% identity in aa 71 - 150.	Putative TIM-barrel enzyme; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.	0.749

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