STM4309 protein (Salmonella enterica Typhimurium)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Score

STM4309

Putative periplasmic or exported protein. (466 aa)

Predicted Functional Partners:

STM4302

0.954

tnpA_6

0.918

phoN

0.767

STM0018

0.749

iroB

0.743

bcfA

0.738

STM3126

0.733

tnpA_1

0.722

cadC

0.720

STM0014

0.700

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
STM0014	STM0018	STM0014	STM0018	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Putative exochitinase.	0.966
STM0014	STM3126	STM0014	STM3126	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	0.581
STM0014	STM4309	STM0014	STM4309	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Putative periplasmic or exported protein.	0.700
STM0014	bcfA	STM0014	STM0021	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Fimbrial subunit (gi\|4959511).	0.546
STM0014	cadC	STM0014	STM2557	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	OmpR family; similar to E. coli transcriptional activator of cad operon (AAC77094.1); Blastp hit to AAC77094.1 (512 aa), 58% identity in aa 1 - 512.	0.735
STM0014	iroB	STM0014	STM2773	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Putative glycosyl transferase; Related to UDP-glucuronosyltransferase.	0.460
STM0018	STM0014	STM0018	STM0014	Putative exochitinase.	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	0.966
STM0018	STM3126	STM0018	STM3126	Putative exochitinase.	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	0.631
STM0018	STM4309	STM0018	STM4309	Putative exochitinase.	Putative periplasmic or exported protein.	0.749
STM0018	bcfA	STM0018	STM0021	Putative exochitinase.	Fimbrial subunit (gi\|4959511).	0.552
STM0018	cadC	STM0018	STM2557	Putative exochitinase.	OmpR family; similar to E. coli transcriptional activator of cad operon (AAC77094.1); Blastp hit to AAC77094.1 (512 aa), 58% identity in aa 1 - 512.	0.483
STM0018	iroB	STM0018	STM2773	Putative exochitinase.	Putative glycosyl transferase; Related to UDP-glucuronosyltransferase.	0.751
STM3126	STM0014	STM3126	STM0014	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	0.581
STM3126	STM0018	STM3126	STM0018	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	Putative exochitinase.	0.631
STM3126	STM4309	STM3126	STM4309	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	Putative periplasmic or exported protein.	0.733
STM3126	bcfA	STM3126	STM0021	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	Fimbrial subunit (gi\|4959511).	0.531
STM3126	iroB	STM3126	STM2773	Putative amino acid transporter; Similar to E. coli proline permease transport protein (AAC73505.1); Blastp hit to AAC73505.1 (457 aa), 25% identity in aa 4 - 415.	Putative glycosyl transferase; Related to UDP-glucuronosyltransferase.	0.517
STM4302	STM4309	STM4302	STM4309	Putative cytoplasmic protein.	Putative periplasmic or exported protein.	0.954
STM4302	tnpA_1	STM4302	STM0946	Putative cytoplasmic protein.	IS200 transposase; Involved in the transposition of the insertion sequence.	0.726
STM4302	tnpA_6	STM4302	STM4311	Putative cytoplasmic protein.	Transposase for insertion sequence element IS200 (SW:T200_SALTY).	0.897

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