STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STM4444Putative inner membrane protein. (214 aa)    
Predicted Functional Partners:
STM4445
Putative dihydroorotase.
    0.974
STM4443
Putative inner membrane protein.
 
    0.955
STM4441
Putative cytoplasmic protein.
 
    0.944
STM4446
Putative selenocysteine synthase; [L-seryl-tRNA(Ser) selenium transferase].
 
    0.934
STM4447
Putative periplasmic protein.
 
    0.930
STM4448
Putative phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
    0.861
STM4413
Putative imidazolonepropionase and related amidohydrolases.
 
    0.795
STM3767
Putative cytoplasmic protein.
 
    0.792
STM3768
Putative selenocysteine synthase (L-seryl-tRNA(Ser) selenium transferase).
 
    0.792
STM4442
Putative cytoplasmic protein.
  
    0.760
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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