STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM4447Putative periplasmic protein. (246 aa)    
Predicted Functional Partners:
STM4446
Putative selenocysteine synthase; [L-seryl-tRNA(Ser) selenium transferase].
 
    0.967
STM4445
Putative dihydroorotase.
 
    0.956
STM4444
Putative inner membrane protein.
 
    0.930
STM4443
Putative inner membrane protein.
 
    0.926
STM4448
Putative phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
    0.918
STM4441
Putative cytoplasmic protein.
 
    0.908
STM3768
Putative selenocysteine synthase (L-seryl-tRNA(Ser) selenium transferase).
 
    0.830
STM4413
Putative imidazolonepropionase and related amidohydrolases.
 
    0.816
STM4442
Putative cytoplasmic protein.
  
    0.608
STM4440
Putative cytoplasmic protein; Nitrogen regulation protein nr(ii) (SW:NTRB_SALTY).
  
    0.603
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.