STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO00903.1Hypothetical protein. (453 aa)    
Predicted Functional Partners:
KRO00902.1
Phage head protein.
 
     0.952
KRO00904.1
PBSX family phage terminase large subunit.
 
  
 0.940
KRO00901.1
Phage minor structural protein GP20.
 
  
 0.922
KRO00900.1
Phage major capsid protein.
 
     0.906
KRO00892.1
Phage core tail protein.
 
  
 0.858
KRO00893.1
Hypothetical protein.
 
    0.854
KRO00891.1
Hypothetical protein.
 
    0.852
KRO00884.1
Hypothetical protein.
 
    0.844
KRO00888.1
Phage protein.
 
    0.843
KRO00885.1
Hypothetical protein.
 
    0.842
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.