STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN99107.1HAD superfamily hydrolase. (249 aa)    
Predicted Functional Partners:
KRN99108.1
Branched-chain amino acid transport protein; Component of the transport system for branched-chain amino acids.
 
     0.799
KRN99611.1
Hypothetical protein.
  
     0.653
KRN98284.1
Hypothetical protein.
  
     0.595
KRN98831.1
Hypothetical protein.
  
     0.573
KRN99109.1
Hypothetical protein.
       0.503
KRO00760.1
Hypothetical protein.
  
     0.476
KRN99259.1
Mannose PTS, EIIAB.
    
  0.454
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.