STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN98929.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.929
KRN98928.1
Hypothetical protein.
       0.732
KRN99698.1
Anaerobic ribonucleoside triphosphate reductase.
    
  0.591
cmk
Cytidylate kinase.
    
  0.575
KRN96318.1
5-nucleotidase 2,3-cyclic phosphodiesterase related esterase; Belongs to the 5'-nucleotidase family.
  
 
  0.571
KRN97937.1
Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.566
KRN97593.1
Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.557
KRN98927.1
Alpha beta hydrolase fold protein.
       0.497
KRN96747.1
Hypothetical protein.
    
  0.470
KRN96075.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.469
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
Server load: low (10%) [HD]