STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN98981.1Zinc iron ABC transporter, substrate-binding lipoprotein precursor. (291 aa)    
Predicted Functional Partners:
KRN98983.1
ABC-type Mn2+ Zn2+ transport system, permease component.
 
 
 0.987
KRN98982.1
Zinc iron ABC transporter, ATP-binding protein.
 
 
 0.962
KRN95346.1
ABC-type Mn2+ Zn2+ transport system, permease component.
 
 
 0.949
KRN98828.1
Iron ABC transporter membrane protein.
 
 
 0.926
KRN98829.1
Manganese ABC transporter, ATP-binding subunit.
 
 
 0.866
KRN95347.1
Zinc iron ABC transporter, ATP-binding protein.
 
 
 0.849
KRN98984.1
GtrA family protein.
  
    0.748
KRN99861.1
Iron-dependent repressor.
  
 
 0.715
rpmB
Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.568
KRO00368.1
Iron-dependent repressor.
  
 
 0.546
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.