Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN98765.1 | KRN98766.1 | IV57_GL000801 | IV57_GL000802 | Transcription regulator. | Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.578 |
KRN98765.1 | KRN98767.1 | IV57_GL000801 | IV57_GL000803 | Transcription regulator. | Hypothetical protein. | 0.566 |
KRN98765.1 | KRN98768.1 | IV57_GL000801 | IV57_GL000804 | Transcription regulator. | Hypothetical protein. | 0.572 |
KRN98765.1 | KRN98769.1 | IV57_GL000801 | IV57_GL000805 | Transcription regulator. | Dihydroorotase. | 0.673 |
KRN98765.1 | KRN98770.1 | IV57_GL000801 | IV57_GL000806 | Transcription regulator. | Putative L-seryl-tRNA(Sec) selenium transferase (putative). | 0.635 |
KRN98765.1 | KRN98771.1 | IV57_GL000801 | IV57_GL000807 | Transcription regulator. | Hypothetical protein. | 0.659 |
KRN98765.1 | KRN98772.1 | IV57_GL000801 | IV57_GL000808 | Transcription regulator. | 2-keto-3-deoxygluconate kinase. | 0.738 |
KRN98766.1 | KRN98765.1 | IV57_GL000802 | IV57_GL000801 | Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | Transcription regulator. | 0.578 |
KRN98766.1 | KRN98767.1 | IV57_GL000802 | IV57_GL000803 | Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | Hypothetical protein. | 0.775 |
KRN98766.1 | KRN98768.1 | IV57_GL000802 | IV57_GL000804 | Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | Hypothetical protein. | 0.924 |
KRN98766.1 | KRN98769.1 | IV57_GL000802 | IV57_GL000805 | Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | Dihydroorotase. | 0.779 |
KRN98766.1 | KRN98770.1 | IV57_GL000802 | IV57_GL000806 | Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | Putative L-seryl-tRNA(Sec) selenium transferase (putative). | 0.795 |
KRN98766.1 | KRN98771.1 | IV57_GL000802 | IV57_GL000807 | Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | Hypothetical protein. | 0.792 |
KRN98766.1 | KRN98772.1 | IV57_GL000802 | IV57_GL000808 | Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 2-keto-3-deoxygluconate kinase. | 0.802 |
KRN98767.1 | KRN98765.1 | IV57_GL000803 | IV57_GL000801 | Hypothetical protein. | Transcription regulator. | 0.566 |
KRN98767.1 | KRN98766.1 | IV57_GL000803 | IV57_GL000802 | Hypothetical protein. | Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.775 |
KRN98767.1 | KRN98768.1 | IV57_GL000803 | IV57_GL000804 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KRN98767.1 | KRN98769.1 | IV57_GL000803 | IV57_GL000805 | Hypothetical protein. | Dihydroorotase. | 0.752 |
KRN98767.1 | KRN98770.1 | IV57_GL000803 | IV57_GL000806 | Hypothetical protein. | Putative L-seryl-tRNA(Sec) selenium transferase (putative). | 0.764 |
KRN98767.1 | KRN98771.1 | IV57_GL000803 | IV57_GL000807 | Hypothetical protein. | Hypothetical protein. | 0.751 |
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