STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN98739.1Hypothetical protein. (633 aa)    
Predicted Functional Partners:
KRN99631.1
CinA domain-containing protein; Belongs to the CinA family.
  
 
  0.927
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.910
KRN99336.1
Beta-glucosides PTS, EIIABC.
    
 
 0.682
KRN99349.1
Beta-glucoside-specific phosphotransferase system (PTS), IIABC component.
    
 
 0.682
KRN99265.1
N-acetylglucosamine and glucose PTS, EIICBA.
    
 
 0.682
KRN99028.1
PTS system, beta-glucoside-specific IIABC component.
    
 
 0.682
KRN99035.1
Sugar-specific permease.
    
 
 0.682
KRO00359.1
Beta-glucosides PTS, EIIABC.
    
 
 0.682
KRN97365.1
Pts system, oligosucrose-specific eiibca component.
    
 
 0.682
KRN99030.1
Hypothetical protein.
    
   0.675
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.