STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN98463.1ABC transporter, ATP-binding protein. (247 aa)    
Predicted Functional Partners:
KRN98462.1
ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
    0.984
KRN98115.1
ABC transporter integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
    0.947
KRN98461.1
ABC transporter, substrate binding protein.
 
    0.924
KRN98116.1
ABC-type uncharacterized transport system, periplasmic component.
 
    0.818
KRN99789.1
ABC-type uncharacterized transport system, periplasmic component.
 
    0.818
KRO00612.1
ABC-type multidrug transport system, ATPase component.
 
     
0.533
Your Current Organism:
Lactobacillus kimchiensis
NCBI taxonomy Id: 993692
Other names: DSM 24716, JCM 17702, KACC 15533, L. kimchiensis, Lactobacillus kimchiensis Kim et al. 2013, Lactobacillus sp. L133, strain L133
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.